You could use CoefficientArrays
. For example:
m = CoefficientArrays[ { Ay[i]-Ay[i+1], -Ax[i]+Ax[i+1]-a Az[i], b Ay[i] }, {Ax[i],Ay[i],Az[i],Ax[i+1],Ay[i+1],Az[i+1]}][[2]];m //Normal //TeXForm
$\left(\begin{array}{cccccc} 0 & 1 & 0 & 0 & -1 & 0 \\ -1 & 0 & -a & 1 & 0 & 0 \\ 0 & b & 0 & 0 & 0 & 0 \\\end{array}\right)$